BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E09LP1|AL428922
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1401 1648 0.0
>3x_Contig1401
Length = 8231
Score = 1648 bits (830), Expect = 0.0
Identities = 861/869 (99%), Gaps = 4/869 (0%)
Strand = Plus / Minus
Query: 1 gatcgtagccgggaagattttctgtgttcatggaggattatcaccagtattgaattcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5599 gatcgtagccgggaagattttctgtgttcatggaggattatcaccagtattgaattcaat 5540
Query: 61 ggatgaaattagacacgtaagcagacctactgatgttccagactttggtctaatcaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5539 ggatgaaattagacacgtaagcagacctactgatgttccagactttggtctaatcaatga 5480
Query: 121 ccttttatggtcggatccaacagattctccaaatgagtgggaagacaacgaacgtggt-g 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5479 ccttttatggtcggatccaacagattctccaaatgagtgggaagacaacgaacgtggttg 5420
Query: 180 tgtcttactgttacaataaggttgcgatcaacaaatttttgaataagtttggctttgatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5419 tgtcttactgttacaataaggttgcgatcaacaaatttttgaataagtttggctttgatt 5360
Query: 240 tagtttgtagagcacatatggtcgtcgaagvgc--tacgagtttttcaatgatagaagtt 297
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 5359 tagtttgtagagcacatatggtcgtcgaagagtcgtacgagtttttcaatgatagaagtt 5300
Query: 298 tggtaacggtattttctgctccaaattactgcggagaatttgataactggggtgcagtaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5299 tggtaacggtattttctgctccaaattactgcggagaatttgataactggggtgcagtaa 5240
Query: 358 tgagcgtgacg-aaggtttattgtgttcgttcgagttgttagaacctctagatagtaccg 416
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5239 tgagcgtgacacaaggtttattgtgttcgttcgagttgttagaacctctagatagtaccg 5180
Query: 417 cattgaaacaagtcatgaagaagggcagacaagaaagaaagcyagccaatcaacaacaac 476
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5179 cattgaaacaagtcatgaagaagggcagacaagaaagaaagctagccaatcaacaacaac 5120
Query: 477 aacaacaacaacaacagcaactggaacaaatacaagagtgaagatcaatatgttgttttc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5119 aacaacaacaacaacagcaactggaacaaatacaagagtgaagatcaatatgttgttttc 5060
Query: 537 attaccaacaatcacatatcgatgtcatactcaatttagcattggtggcttgattaacag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5059 attaccaacaatcacatatcgatgtcatactcaatttagcattggtggcttgattaacag 5000
Query: 597 tcacattaaatactttacagtgtttattttacattctcgtcatttcttaccaaaagaacc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4999 tcacattaaatactttacagtgtttattttacattctcgtcatttcttaccaaaagaacc 4940
Query: 657 atctcaatgatatcttattaaaggacagttattagtgaagagtcctttgggtgtttttgc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4939 atctcaatgatatcttattaaaggacagttattagtgaagagtcctttgggtgtttttgc 4880
Query: 717 catgagattcaacaaatatatttttcagatgttgaagctttcccttactaatcttcgtct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4879 catgagattcaacaaatatatttttcagatgttgaagctttcccttactaatcttcgtct 4820
Query: 777 ttattcgtaactactactgtggagattaacacttacatattcgattctaggagttaatcc 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4819 ttattcgtaactactactgtggagattaacacttacatattcgattctaggagttaatcc 4760
Query: 837 taagtgttttcctcaaaaacaaatctttc 865
|||||||||||||||||||||||||||||
Sbjct: 4759 taagtgttttcctcaaaaacaaatctttc 4731
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8703
Number of Sequences: 1807
Number of extensions: 8703
Number of successful extensions: 712
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)